Welcome: Hubei Chuchang Biotech Co.,Ltd.

Latest News

To solve the bottleneck of in vivo delivery of lead editors, Liu Ruqian’s team released an improved version of virus-like particle vector

Pilot editing can precisely install genomic replacements, insertions and deletions in living systems. However, efficient delivery of lead editing components in vitro and in vivo remains a challenge.

On January 8, 2024, the team of David R. Liu from the Broad Institute published a research paper titled "Engineered virus-like particles for transient delivery of prime editor ribonucleoprotein complexes in vivo" online in Nature Biotechnology. The research report developed lead editor engineered virus-like particles (PE-eVLPs), which can deliver lead editing proteins, lead editing guide RNAs, and single guide RNAs as transient ribonucleoprotein complexes.

Compared with PE-eVLP structures based on previously reported base editor eVLP architectures, we systematically designed v3 and v3b PE-eVLPs with 65- to 170-fold improvement in editing efficiency in human cells. In two mouse models of genetic blindness, a single injection of v3b PE-eVLPs resulted in treatment-related levels of lead editing in the retina, restoration of protein expression and partial recovery of visual function. Optimized PE-eVLPs support transient delivery of lead editing ribonucleoproteins in vivo, improving the potential safety of lead editing by reducing off-target editing and eliminating the possibility of oncogenic transgene integration.


3.png
      Among current genome editing systems, leader editing offers unusual versatility in dividing and non-dividing mammalian cells in vitro and in vivo, allowing the replacement of a target DNA sequence with virtually any other specified sequence, including Up to hundreds of inserted, deleted, or substituted base pairs. This versatility makes PE systems particularly promising in treating a wide range of human genetic diseases. Lead editor (PE) is an engineered protein consisting of a catalytically compromised programmable nickase domain (such as Cas9 nickase) fused to an engineered reverse transcriptase (RT) domain. Prime editing guide RNA (pegRNA) specifies the target protospacer sequence while encoding the desired edit in the reverse transcription template of the pegRNA 3' extension. The mechanism of pilot editing requires three independent nucleic acid hybridization events to enable editing and does not rely on double-stranded DNA breaks or donor DNA templates. Because of this mechanism, leader editing is inherently resistant to off-target or bystander editing and can proceed with very few indel labeling byproducts or other undesirable consequences of double-stranded DNA breaks.
      To fully realize the potential of lead editing for mammalian research or therapeutic applications, safe and effective methods that can deliver PE to tissues in vivo are required. So far, several research groups have reported the in vivo administration of PE via viral delivery methods, including adenovirus and adeno-associated virus (AAV). However, viral delivery methods require the transgene to be encoded directly in a viral gene expression cassette, limiting the size of the transgene. The AAV genome has a cargo gene size limit of approximately 4.7 kb (excluding inverted terminal repeats), which requires splitting large cargo such as PE (the gene size of first-generation PE is 6.4 kb) into multiple AAVs, limiting Editing efficiency, especially at medium or low vector doses. Viral delivery methods also present potential safety risks, including continued transgene expression that increases off-target editing and the potential for integration of unwanted cargo DNA into the host cell genome. Non-viral delivery methods, such as lipid nanoparticles, avoid these problems by packaging editors into transiently expressing messenger RNAs (mRNAs). However, despite recent advances in research targeting hematopoietic stem cells, effective therapeutic gene editing in vivo, non-virally targeted to tissues other than the liver, remains a challenge.
2.png
pegRNA   and      ngRNA
     Virus-like particles (VLPs) are a potentially promising delivery tool that in principle offer the major advantages of viral and non-viral delivery methods. VLPs are formed by the spontaneous assembly and budding of retroviral polyproteins that encapsulate cargo molecules from the producer cell. VLPs lack packaging genomes but retain the ability to transduce mammalian cells and release cargo. Previous studies explored VLPs for delivery of Cas9 nuclease. Efficient in vivo delivery of adenine base editors (ABEs): single guide RNA (sgRNA) ribonucleoproteins (RNPs) combined with iteratively engineered virus-like particles (eVLPs) was recently reported to overcome specific molecules in cargo packaging, release, and localization bottleneck.
     This study reports the development of a PE-eVLPs system that provides a complete PE system including pegRNAs and nicking sgRNAs (ngRNAs) as RNPs. Simply replacing base editors (BEs) with PEs in the optimized BE-eVLP system resulted in a leader editing system with very low functional delivery (editing efficiency <1% in cultured mammalian cells). By systematically identifying PE-eVLP delivery bottlenecks and designing corresponding solutions, a third-generation v3 PE-eVLP was developed with improved initial editing efficiency compared with v1 PE-eVLP in mouse neuro-2a (N2A) cells 79-fold and 170-fold increase in human HEK293T cells. In mouse models, a single subretinal injection of v3 PE-eVLPs showed efficient in vivo lead editing, correcting a 4 bp deletion in Mfrp (average efficiency 15%) in the rd6 mouse retinal degeneration model and in the rd12 model Corrected Rpe65 substitution to partially restore visual function (average efficiency 7.2%). This study establishes PE-eVLP as a virus-free method to deliver a primer editing system in vivo in the form of RNPs.



RELATED NEWS

CATEGORIES

CONTACT US

Contact: Mr.Ren

Phone: 15623560702

Tel: 86-15623560702

Email: info@chuchangbiotech.com

Add: Chuangye Street, Hongshan District,Wuhan,Hubei Province,China.